MLOC_42348 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains32.943417.1227.454517.9561
LEAShoots from the seedlings (10 cm shoot stage)20.204513.919117.865411.4175
INF1Young developing inflorescences (5mm)14.958217.775515.11929.90413
INF2Developing inflorescences (1-1.5 cm)12.70514.539112.251211.7171
ROORoots from the seedlings (10 cm shoot stage)37.249917.399217.123819.2516
NODDeveloping tillers at six leaf stage, 3rd internode94.7206123.629151.402312.349
CAR5Developing grain, bracts removed (5 DPA)9.058618.47459.374066.68772
CAR15Developing grain, bracts removed (15 DPA)1.593280.8265721.892922.62664



CDS Structure of MLOC_42348






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_42348.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_42348.1CUST_5906_PI427708083AvailableAvailablecontig_2638758 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g64920.1 -2 7e-16 75 38/40 (95%) 13101.m07004 protein nuclear matrix protein 1, putative, expressed
TAIR PP10None-----