- Predicted Gene MLOC_42348
MLOC_42348 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_42348_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_42348_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 32.9434 | 17.12 | 27.4545 | 17.9561 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 20.2045 | 13.9191 | 17.8654 | 11.4175 |
INF1 | Young developing inflorescences (5mm) | 14.9582 | 17.7755 | 15.1192 | 9.90413 |
INF2 | Developing inflorescences (1-1.5 cm) | 12.705 | 14.5391 | 12.2512 | 11.7171 |
ROO | Roots from the seedlings (10 cm shoot stage) | 37.2499 | 17.3992 | 17.1238 | 19.2516 |
NOD | Developing tillers at six leaf stage, 3rd internode | 94.7206 | 123.629 | 151.402 | 312.349 |
CAR5 | Developing grain, bracts removed (5 DPA) | 9.05861 | 8.4745 | 9.37406 | 6.68772 |
CAR15 | Developing grain, bracts removed (15 DPA) | 1.59328 | 0.826572 | 1.89292 | 2.62664 |
CDS Structure of MLOC_42348
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_42348.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g64920.1 |
-2 |
7e-16 |
75 |
38/40 (95%) |
13101.m07004 protein nuclear matrix protein 1, putative, expressed |
TAIR PP10 | None | - | - | - | - | - |