MLOC_42339 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains51.177118.613822.416628.6135
LEAShoots from the seedlings (10 cm shoot stage)26.147113.723923.460318.0689
INF1Young developing inflorescences (5mm)56.109168.633388.322655.4404
INF2Developing inflorescences (1-1.5 cm)58.06379.152781.158476.6999
ROORoots from the seedlings (10 cm shoot stage)66.482327.769232.685142.5501
NODDeveloping tillers at six leaf stage, 3rd internode15.293540.912164.8381131.691
CAR5Developing grain, bracts removed (5 DPA)20.682924.680620.382220.7531
CAR15Developing grain, bracts removed (15 DPA)8.426635.739638.12116.524



CDS Structure of MLOC_42339






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_42339.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_42339.1CUST_3658_PI427708086AvailableAvailablecontig_2638113 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----