MLOC_42305 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains68.0382124.237105.656122.874
LEAShoots from the seedlings (10 cm shoot stage)115.39880.690275.787389.9792
INF1Young developing inflorescences (5mm)188.88183.328176.837172.157
INF2Developing inflorescences (1-1.5 cm)192.264186.233160.14219.069
ROORoots from the seedlings (10 cm shoot stage)80.68997.498478.1046138.994
NODDeveloping tillers at six leaf stage, 3rd internode19.302927.699842.462118.365
CAR5Developing grain, bracts removed (5 DPA)213.697192.01201.975218.92
CAR15Developing grain, bracts removed (15 DPA)158.073118.744112.519329.381



CDS Structure of MLOC_42305






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK250137.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK250137.1CUST_23326_PI427708080NoneNoneNone
MLOC_1046.1NoneAvailableNonecontig_108744 (Mapped)
MLOC_42305.1NoneAvailableAvailablecontig_263642 (Mapped)
MLOC_67129.1NoneAvailableNonecontig_52608 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----