MLOC_42292 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains8.591518.156310.45240
LEAShoots from the seedlings (10 cm shoot stage)7.822517.644710.74050
INF1Young developing inflorescences (5mm)0.2499181.546591.30280
INF2Developing inflorescences (1-1.5 cm)0.5562260.3488141.463970
ROORoots from the seedlings (10 cm shoot stage)8.6230411.01524.26010
NODDeveloping tillers at six leaf stage, 3rd internode5.8010513.365511.46840
CAR5Developing grain, bracts removed (5 DPA)8.092426.287642.311650
CAR15Developing grain, bracts removed (15 DPA)10.647213.877311.34590



CDS Structure of MLOC_42292






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by AK248174.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK248174.1CUST_7951_PI427708086NoneNoneNone
MLOC_41570.1NoneAvailableNonecontig_2595554 (Not mapped)
MLOC_42292.1NoneAvailableNonecontig_2635858 (Not mapped)
MLOC_47703.1NoneAvailableNonecontig_310720 (Mapped)
MLOC_51579.3NoneAvailableNonecontig_369741 (Mapped)
MLOC_76644.1NoneAvailableNonecontig_72176 (Mapped)
MLOC_80643.3NoneAvailableAvailablecontig_91883 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----