- Predicted Gene MLOC_42279
MLOC_42279 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 7.88005 | 6.00447 | 6.57688 | 6.7223 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 17.732 | 11.8914 | 18.8672 | 12.9696 |
| INF1 | Young developing inflorescences (5mm) | 9.71982 | 11.7625 | 11.6824 | 10.234 |
| INF2 | Developing inflorescences (1-1.5 cm) | 7.00731 | 7.07713 | 7.70109 | 8.54567 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 3.80165 | 3.15578 | 4.6479 | 3.65566 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 13.0862 | 12.963 | 20.4768 | 38.7026 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 10.3144 | 12.2699 | 8.29668 | 10.8626 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.319835 | 0.310989 | 0.386453 | 0.8657 |
CDS Structure of MLOC_42279
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_42279.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os06g48600.1 |
-1 |
1e-63 |
198 |
97/115 (84%) |
13106.m05168 protein macrophage migration inhibitory factor, putative, expressed |
| TAIR PP10 |
AT5G57170.1 |
-1 |
4e-45 |
150 |
71/115 (62%) |
Tautomerase/MIF superfamily protein | chr5:23162201-23163140 REVERSE LENGTH=115 |