MLOC_42261 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains16.545822.303831.53850
LEAShoots from the seedlings (10 cm shoot stage)53.864993.275129.85850
INF1Young developing inflorescences (5mm)21.450517.287222.42190
INF2Developing inflorescences (1-1.5 cm)6.788599.531955.005360
ROORoots from the seedlings (10 cm shoot stage)13.96617.095728.48440
NODDeveloping tillers at six leaf stage, 3rd internode28.3066.949223.417690
CAR5Developing grain, bracts removed (5 DPA)5.493478.7591912.87670
CAR15Developing grain, bracts removed (15 DPA)7.219368.193485.441320



CDS Structure of MLOC_42261






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK371709
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK371709CUST_22186_PI427708080NoneNoneNone
MLOC_20256.1NoneAvailableNonecontig_1588825 (Mapped)
MLOC_32903.1NoneAvailableNonecontig_232879 (Mapped)
MLOC_42261.1NoneAvailableNonecontig_2633749 (Not mapped)
MLOC_68460.1NoneAvailableAvailablecontig_54820 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----