MLOC_4225 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_4225_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_4225_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 85.5317 | 123.989 | 112.184 | 101.808 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 144.699 | 181.8 | 152.852 | 116.553 |
INF1 | Young developing inflorescences (5mm) | 74.7396 | 79.288 | 77.991 | 66.0346 |
INF2 | Developing inflorescences (1-1.5 cm) | 111.195 | 107.219 | 98.5967 | 114.708 |
ROO | Roots from the seedlings (10 cm shoot stage) | 312.756 | 249.06 | 274.231 | 246.621 |
NOD | Developing tillers at six leaf stage, 3rd internode | 120.89 | 164.3 | 182.315 | 380.776 |
CAR5 | Developing grain, bracts removed (5 DPA) | 370.438 | 406.973 | 332.445 | 350.17 |
CAR15 | Developing grain, bracts removed (15 DPA) | 60.6718 | 46.3591 | 57.2629 | 130.841 |
CDS Structure of MLOC_4225
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_4225.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os05g49200.2 |
+1 |
3e-72 |
233 |
122/146 (84%) |
13105.m05261 protein aspartic proteinase oryzasin-1 precursor, putative, expressed |
TAIR PP10 |
AT1G11910.1 |
+1 |
2e-53 |
182 |
86/140 (61%) |
| Symbols: APA1, ATAPA1 | aspartic proteinase A1 | chr1:4017119-4019874 REVERSE LENGTH=506 |