MLOC_42246 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains00.43023400
LEAShoots from the seedlings (10 cm shoot stage)1.045780.7885431.101850
INF1Young developing inflorescences (5mm)00.197931.601040
INF2Developing inflorescences (1-1.5 cm)0.6681230.6263480.4104960
ROORoots from the seedlings (10 cm shoot stage)00.23885300
NODDeveloping tillers at six leaf stage, 3rd internode0.1565740.1342760.06042170
CAR5Developing grain, bracts removed (5 DPA)0.198601000
CAR15Developing grain, bracts removed (15 DPA)000.2570760



CDS Structure of MLOC_42246






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK356167
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK356167CUST_19624_PI427708080NoneNoneNone
MLOC_29765.1NoneAvailableNonecontig_2035179 (Not mapped)
MLOC_30754.1NoneAvailableNonecontig_2123438 (Not mapped)
MLOC_31527.1NoneAvailableNonecontig_2198182 (Not mapped)
MLOC_32933.1NoneAvailableNonecontig_2330526 (Not mapped)
MLOC_33012.1NoneAvailableNonecontig_2337217 (Not mapped)
MLOC_33870.1NoneAvailableNonecontig_2410530 (Not mapped)
MLOC_34335.1NoneAvailableNonecontig_2435919 (Not mapped)
MLOC_38890.1NoneAvailableNonecontig_2551659 (Not mapped)
MLOC_42246.1NoneAvailableNonecontig_2633149 (Not mapped)
MLOC_43581.1NoneAvailableNonecontig_271459 (Mapped)
MLOC_48741.1NoneAvailableAvailablecontig_328857 (Mapped)
MLOC_68961.1NoneAvailableNonecontig_556477 (Not mapped)
MLOC_75544.1NoneAvailableNonecontig_681862 (Not mapped)
MLOC_75800.1NoneAvailableNonecontig_6898 (Mapped)
MLOC_77660.1NoneAvailableNonecontig_766286 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----