- Predicted Gene MLOC_42239
MLOC_42239 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_42239_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_42239_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 0 | 0 | 0.554754 | 0.435377 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0.623744 | 2.14891 | 2.75542 | 1.81547 |
INF1 | Young developing inflorescences (5mm) | 2.52311 | 1.42072 | 0 | 1.40087 |
INF2 | Developing inflorescences (1-1.5 cm) | 2.07475 | 4.52541 | 1.45219 | 3.90253 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0 | 0.887638 | 3.35428 | 2.34839 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.285563 | 0.689017 | 0.573868 | 2.15674 |
CAR5 | Developing grain, bracts removed (5 DPA) | 3.1765 | 3.27784 | 1.82352 | 3.21551 |
CAR15 | Developing grain, bracts removed (15 DPA) | 1.25981 | 1.79472 | 2.37706 | 4.37768 |
CDS Structure of MLOC_42239
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_42239.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os02g21840.1 |
+1 |
4e-12 |
62 |
32/65 (49%) |
13102.m02448 protein retrotransposon protein, putative, unclassified |
TAIR PP10 | None | - | - | - | - | - |