MLOC_42196 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.245540.9556561.783990
LEAShoots from the seedlings (10 cm shoot stage)0.5138951.7419600
INF1Young developing inflorescences (5mm)1.574772.027080.6729180
INF2Developing inflorescences (1-1.5 cm)1.493140.4601570.6121170
ROORoots from the seedlings (10 cm shoot stage)0.6724890.7012040.9063250
NODDeveloping tillers at six leaf stage, 3rd internode0.2341560.2872230.3926310
CAR5Developing grain, bracts removed (5 DPA)0.610361.123131.224040
CAR15Developing grain, bracts removed (15 DPA)00.2792480.3745120



CDS Structure of MLOC_42196






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK359463
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK359463CUST_24232_PI427708080NoneNoneNone
MLOC_42196.1NoneAvailableNonecontig_2630267 (Not mapped)
MLOC_47739.1NoneAvailableAvailablecontig_31138 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----