MLOC_42150 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains141.769113.914123.890
LEAShoots from the seedlings (10 cm shoot stage)65.0972111.449113.2150
INF1Young developing inflorescences (5mm)42.132651.48554.55880
INF2Developing inflorescences (1-1.5 cm)30.251423.880329.21210
ROORoots from the seedlings (10 cm shoot stage)105.93892.4779102.2420
NODDeveloping tillers at six leaf stage, 3rd internode49.932432.997836.7670
CAR5Developing grain, bracts removed (5 DPA)39.805446.959955.61510
CAR15Developing grain, bracts removed (15 DPA)32.765931.186935.6430



CDS Structure of MLOC_42150






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK251444.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK251444.1CUST_19013_PI427708080NoneNoneNone
MLOC_27982.1NoneAvailableNonecontig_188054 (Mapped)
MLOC_28695.1NoneAvailableNonecontig_194039 (Not mapped)
MLOC_32450.1NoneAvailableNonecontig_228741 (Not mapped)
MLOC_35516.1NoneAvailableNonecontig_2495898 (Not mapped)
MLOC_41565.1NoneAvailableNonecontig_2595115 (Mapped)
MLOC_41725.1NoneAvailableNonecontig_2603074 (Not mapped)
MLOC_41927.1NoneAvailableNonecontig_2614004 (Not mapped)
MLOC_42150.1NoneAvailableNonecontig_2627146 (Mapped)
MLOC_66041.2NoneAvailableAvailablecontig_51038 (Mapped)
MLOC_80288.1NoneAvailableNonecontig_89632 (Mapped)
MLOC_892.1NoneAvailableNonecontig_107359 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----