MLOC_42130 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains6.211291.783598.051430
LEAShoots from the seedlings (10 cm shoot stage)3.1389602.935370
INF1Young developing inflorescences (5mm)18.558410.326118.99470
INF2Developing inflorescences (1-1.5 cm)18.316125.291410.87030
ROORoots from the seedlings (10 cm shoot stage)14.68769.5229400
NODDeveloping tillers at six leaf stage, 3rd internode1.41986.357114.122420
CAR5Developing grain, bracts removed (5 DPA)10.384612.891814.46730
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_42130






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK250764.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK250764.1CUST_18903_PI427708080NoneNoneNone
MLOC_24724.1NoneAvailableNonecontig_16523 (Not mapped)
MLOC_32527.1NoneAvailableNonecontig_22940 (Not mapped)
MLOC_35928.1NoneAvailableNonecontig_252632 (Mapped)
MLOC_42130.1NoneAvailableNonecontig_2626256 (Not mapped)
MLOC_46449.1NoneAvailableNonecontig_29055 (Not mapped)
MLOC_4788.1NoneAvailableNonecontig_1355068 (Not mapped)
MLOC_49084.1NoneAvailableNonecontig_335269 (Not mapped)
MLOC_53879.1NoneAvailableNonecontig_387091 (Not mapped)
MLOC_62271.1NoneAvailableAvailablecontig_463687 (Mapped)
MLOC_62272.3NoneAvailableNonecontig_463687 (Mapped)
MLOC_68490.1NoneAvailableNonecontig_54866 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----