MLOC_42127 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains23.05959.5411220.58230
LEAShoots from the seedlings (10 cm shoot stage)2.256525.139526.22370
INF1Young developing inflorescences (5mm)6.237892.5250712.48160
INF2Developing inflorescences (1-1.5 cm)5.367998.970125.846470
ROORoots from the seedlings (10 cm shoot stage)04.407734.49210
NODDeveloping tillers at six leaf stage, 3rd internode1.106122.00451.560930
CAR5Developing grain, bracts removed (5 DPA)8.4468810.18191.466530
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_42127






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK359551
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK359551CUST_20109_PI427708080NoneNoneNone
MLOC_32232.1NoneAvailableNonecontig_226593 (Mapped)
MLOC_41275.1NoneAvailableNonecontig_2580534 (Not mapped)
MLOC_42127.1NoneAvailableNonecontig_2626179 (Not mapped)
MLOC_42826.1NoneAvailableAvailablecontig_2664800 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----