- Predicted Gene MLOC_42110
MLOC_42110 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_42110_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_42110_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 9.4133 | 10.4474 | 13.2009 | 13.4386 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 14.5505 | 6.24015 | 6.11711 | 8.88178 |
INF1 | Young developing inflorescences (5mm) | 10.5836 | 11.5063 | 12.367 | 11.6361 |
INF2 | Developing inflorescences (1-1.5 cm) | 20.8858 | 19.1992 | 20.868 | 25.3627 |
ROO | Roots from the seedlings (10 cm shoot stage) | 17.8589 | 20.6178 | 19.4172 | 31.9464 |
NOD | Developing tillers at six leaf stage, 3rd internode | 19.8373 | 17.8155 | 9.35649 | 72.1445 |
CAR5 | Developing grain, bracts removed (5 DPA) | 25.3818 | 24.5852 | 25.0062 | 29.2231 |
CAR15 | Developing grain, bracts removed (15 DPA) | 11.3418 | 9.31264 | 7.64221 | 27.5202 |
CDS Structure of MLOC_42110
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_42110.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os06g13680.1 |
+2 |
6e-20 |
81 |
37/44 (84%) |
13106.m01510 protein B12D protein, putative, expressed |
TAIR PP10 |
AT3G48140.1 |
+2 |
1e-11 |
58 |
25/43 (58%) |
B12D protein | chr3:17778471-17779299 FORWARD LENGTH=88 |