MLOC_42082 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.993761.721351.393960
LEAShoots from the seedlings (10 cm shoot stage)2.634491.75732.658820
INF1Young developing inflorescences (5mm)2.308492.70874.027580
INF2Developing inflorescences (1-1.5 cm)3.288793.921633.258330
ROORoots from the seedlings (10 cm shoot stage)3.327493.978643.169580
NODDeveloping tillers at six leaf stage, 3rd internode2.333874.666685.440780
CAR5Developing grain, bracts removed (5 DPA)5.107135.952366.140680
CAR15Developing grain, bracts removed (15 DPA)0.8281171.273470.9457980



CDS Structure of MLOC_42082






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK369723
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK369723CUST_21833_PI427708080NoneNoneNone
MLOC_42082.2NoneAvailableNonecontig_2623002 (Not mapped)
MLOC_72420.3NoneAvailableAvailablecontig_61603 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----