MLOC_42078 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains237.355291.23333.60
LEAShoots from the seedlings (10 cm shoot stage)411.169118.984117.3350
INF1Young developing inflorescences (5mm)142.604131.365134.7480
INF2Developing inflorescences (1-1.5 cm)72.209278.624472.66790
ROORoots from the seedlings (10 cm shoot stage)74.214490.5212102.1440
NODDeveloping tillers at six leaf stage, 3rd internode407.65147.29342.62460
CAR5Developing grain, bracts removed (5 DPA)129.538113.504127.6770
CAR15Developing grain, bracts removed (15 DPA)10.07559.8038113.17130



CDS Structure of MLOC_42078






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK249710.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK249710.1CUST_18727_PI427708080NoneNoneNone
MLOC_1810.2NoneAvailableNonecontig_116043 (Mapped)
MLOC_42078.1NoneAvailableNonecontig_2622836 (Not mapped)
MLOC_55113.1NoneAvailableNonecontig_39669 (Mapped)
MLOC_66461.2NoneAvailableAvailablecontig_51584 (Mapped)
MLOC_78912.3NoneAvailableNonecontig_8246 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----