MLOC_42046 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.33640.9536910.936690
LEAShoots from the seedlings (10 cm shoot stage)127.2736.150512.889620
INF1Young developing inflorescences (5mm)0.4638370.1034760.4503280
INF2Developing inflorescences (1-1.5 cm)2.974292.474796.210070
ROORoots from the seedlings (10 cm shoot stage)293.84218.860126.2420
NODDeveloping tillers at six leaf stage, 3rd internode3.128576.282223.35550
CAR5Developing grain, bracts removed (5 DPA)7.7678414.09635.570260
CAR15Developing grain, bracts removed (15 DPA)49.806162.504933.91950



CDS Structure of MLOC_42046






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK375970
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK375970CUST_22931_PI427708080NoneNoneNone
MLOC_42046.1NoneAvailableNonecontig_2620631 (Not mapped)
MLOC_47287.1NoneAvailableNonecontig_303537 (Mapped)
MLOC_4817.1NoneAvailableAvailablecontig_135539 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----