MLOC_42045 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.20495.86658.082190
LEAShoots from the seedlings (10 cm shoot stage)3.47043.829732.318170
INF1Young developing inflorescences (5mm)5.786036.248458.577990
INF2Developing inflorescences (1-1.5 cm)6.070535.739556.139550
ROORoots from the seedlings (10 cm shoot stage)2.130844.6380913.21890
NODDeveloping tillers at six leaf stage, 3rd internode5.8234413.926610.88470
CAR5Developing grain, bracts removed (5 DPA)2.943375.863656.032940
CAR15Developing grain, bracts removed (15 DPA)9.2067812.559512.42530



CDS Structure of MLOC_42045






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by AK365877
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK365877CUST_14223_PI427708083NoneNoneNone
MLOC_42045.1NoneAvailableNonecontig_262059 (Not mapped)
MLOC_44498.1NoneAvailableAvailablecontig_274828 (Mapped)
MLOC_50425.1NoneAvailableNonecontig_359914 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----