MLOC_42031 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains31.439227.973131.35140
LEAShoots from the seedlings (10 cm shoot stage)26.962227.525235.68760
INF1Young developing inflorescences (5mm)53.701649.361345.95210
INF2Developing inflorescences (1-1.5 cm)57.416341.952446.36190
ROORoots from the seedlings (10 cm shoot stage)33.393233.997829.9340
NODDeveloping tillers at six leaf stage, 3rd internode29.738323.738333.71350
CAR5Developing grain, bracts removed (5 DPA)23.469323.765824.46090
CAR15Developing grain, bracts removed (15 DPA)8.477346.510267.439650



CDS Structure of MLOC_42031






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK366321
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK366321CUST_25007_PI427708080NoneNoneNone
MLOC_24707.1NoneAvailableAvailablecontig_165169 (Mapped)
MLOC_30490.1NoneAvailableNonecontig_2102724 (Not mapped)
MLOC_3409.1NoneAvailableNonecontig_130600 (Mapped)
MLOC_42031.1NoneAvailableNonecontig_2619328 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----