MLOC_41954 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0000
LEAShoots from the seedlings (10 cm shoot stage)2.559323.843712.124730
INF1Young developing inflorescences (5mm)2.878584.915261.788180
INF2Developing inflorescences (1-1.5 cm)2.783422.6347300
ROORoots from the seedlings (10 cm shoot stage)1.363630.744572.572590
NODDeveloping tillers at six leaf stage, 3rd internode0.7230140.8739751.239770
CAR5Developing grain, bracts removed (5 DPA)2.490321.096833.618190
CAR15Developing grain, bracts removed (15 DPA)2.43681000



CDS Structure of MLOC_41954






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK373887
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK373887CUST_25795_PI427708080NoneNoneNone
MLOC_1896.1NoneAvailableNonecontig_1169186 (Not mapped)
MLOC_26260.1NoneAvailableNonecontig_1744408 (Mapped)
MLOC_29508.1NoneAvailableNonecontig_2012068 (Mapped)
MLOC_31516.1NoneAvailableNonecontig_219765 (Mapped)
MLOC_41438.1NoneAvailableNonecontig_2588457 (Mapped)
MLOC_41954.1NoneAvailableNonecontig_2615475 (Not mapped)
MLOC_42260.1NoneAvailableNonecontig_263371 (Not mapped)
MLOC_46900.1NoneAvailableAvailablecontig_297417 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----