- Predicted Gene MLOC_41860
MLOC_41860 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 26.3216 | 22.0434 | 25.9021 | 16.6732 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 32.5271 | 34.6206 | 46.9553 | 22.4696 |
| INF1 | Young developing inflorescences (5mm) | 18.0595 | 22.2687 | 26.6033 | 11.8769 |
| INF2 | Developing inflorescences (1-1.5 cm) | 14.132 | 14.7048 | 13.972 | 11.3612 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 44.1978 | 38.2738 | 40.1659 | 31.5101 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 31.0058 | 32.1817 | 33.8975 | 77.9555 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 11.9451 | 11.103 | 10.2848 | 7.45043 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 2.9549 | 3.94551 | 3.58595 | 4.93159 |
CDS Structure of MLOC_41860
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_41860.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os11g40140.1 |
-3 |
3e-48 |
167 |
82/86 (95%) |
13111.m03969 protein peptidase, T1 family, putative, expressed |
| TAIR PP10 |
AT1G53850.2 |
-3 |
7e-47 |
162 |
80/86 (93%) |
| Symbols: PAE1 | 20S proteasome alpha subunit E1 | chr1:20104131-20105792 REVERSE LENGTH=237 |