MLOC_4183 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 8.30645 | 8.20346 | 7.32814 | 7.65974 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 9.72974 | 11.387 | 9.50297 | 8.36186 |
| INF1 | Young developing inflorescences (5mm) | 6.86038 | 8.50351 | 7.41569 | 5.97235 |
| INF2 | Developing inflorescences (1-1.5 cm) | 4.54203 | 6.25952 | 6.40637 | 5.97779 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 8.96669 | 8.8081 | 9.61317 | 10.1666 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 9.9613 | 11.6756 | 11.2486 | 39.1057 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 5.54565 | 4.27751 | 5.10992 | 4.59683 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 3.82566 | 4.25748 | 4.92195 | 8.83319 |
CDS Structure of MLOC_4183
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_4183.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os06g03840.1 |
+3 |
0.0 |
541 |
303/434 (70%) |
13106.m00328 protein H-BTB4 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with H family conserved sequence, expressed |
| TAIR PP10 |
AT3G05675.1 |
+3 |
3e-78 |
256 |
161/429 (38%) |
BTB/POZ domain-containing protein | chr3:1658425-1659859 REVERSE LENGTH=441 |
