- Predicted Gene MLOC_41808
MLOC_41808 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 1.8315 | 2.87916 | 2.8601 | 2.79495 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 2.93231 | 3.73064 | 3.72763 | 3.07141 |
| INF1 | Young developing inflorescences (5mm) | 5.42257 | 3.91919 | 5.48748 | 4.39031 |
| INF2 | Developing inflorescences (1-1.5 cm) | 8.24977 | 3.75739 | 5.15484 | 6.26946 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 4.57024 | 3.70848 | 5.50757 | 5.03786 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 3.26856 | 1.52198 | 2.7532 | 4.50715 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 1.45835 | 1.19941 | 1.76807 | 1.60279 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.248485 | 0.453241 | 0.433015 | 0.960656 |
CDS Structure of MLOC_41808
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_41808.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g70380.1 |
+2 |
5e-28 |
114 |
55/64 (86%) |
13101.m07647 protein serine palmitoyltransferase 2, putative, expressed |
| TAIR PP10 |
AT5G23670.2 |
+2 |
1e-21 |
95 |
44/64 (69%) |
| Symbols: LCB2 | long chain base2 | chr5:7981889-7985037 FORWARD LENGTH=489 |