MLOC_41727 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains000.7354210
LEAShoots from the seedlings (10 cm shoot stage)0.872381000
INF1Young developing inflorescences (5mm)0.4806640.4735291.197150
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)00.47430100
NODDeveloping tillers at six leaf stage, 3rd internode0.4824940.4341590.2301030
CAR5Developing grain, bracts removed (5 DPA)00.3754360.4979170
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_41727






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK366718
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK366718CUST_21337_PI427708080NoneNoneNone
MLOC_2821.1NoneAvailableNonecontig_125065 (Mapped)
MLOC_31898.1NoneAvailableNonecontig_2233335 (Mapped)
MLOC_41727.1NoneAvailableNonecontig_2603094 (Not mapped)
MLOC_47583.1NoneAvailableAvailablecontig_308509 (Mapped)
MLOC_47584.1NoneAvailableNonecontig_308509 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----