MLOC_4172 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains9.061039.1423210.10820
LEAShoots from the seedlings (10 cm shoot stage)4.66310.374611.40590
INF1Young developing inflorescences (5mm)0.1072460.2879090.670220
INF2Developing inflorescences (1-1.5 cm)0.5100490.04360730.2454320
ROORoots from the seedlings (10 cm shoot stage)11.77976.715819.525750
NODDeveloping tillers at six leaf stage, 3rd internode1.045992.683272.963870
CAR5Developing grain, bracts removed (5 DPA)1.423191.34961.085670
CAR15Developing grain, bracts removed (15 DPA)1.076771.231610.4640350



CDS Structure of MLOC_4172






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_4172.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK373979NoneNoneNoneNone
MLOC_4172.1CUST_201_PI427708080AvailableNonecontig_134787 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g51410.1 -1 1e-19 84 52/67 (78%) 13104.m05245 protein expressed protein
TAIR PP10None-----