MLOC_41633 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.69085.014175.880810
LEAShoots from the seedlings (10 cm shoot stage)6.580491.643272.275030
INF1Young developing inflorescences (5mm)9.650967.9867511.79550
INF2Developing inflorescences (1-1.5 cm)15.144616.858315.09970
ROORoots from the seedlings (10 cm shoot stage)1.125153.043011.82050
NODDeveloping tillers at six leaf stage, 3rd internode1.686713.927932.912920
CAR5Developing grain, bracts removed (5 DPA)11.42467.240778.364720
CAR15Developing grain, bracts removed (15 DPA)3.957793.322843.746230



CDS Structure of MLOC_41633






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK372440
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK372440CUST_25642_PI427708080NoneNoneNone
MLOC_1019.1NoneAvailableNonecontig_1085557 (Not mapped)
MLOC_24100.1NoneAvailableNonecontig_1636694 (Mapped)
MLOC_27107.2NoneAvailableNonecontig_180696 (Not mapped)
MLOC_27559.1NoneAvailableNonecontig_1843194 (Mapped)
MLOC_29015.1NoneAvailableAvailablecontig_1966601 (Mapped)
MLOC_33706.1NoneAvailableNonecontig_239659 (Mapped)
MLOC_34133.1NoneAvailableNonecontig_242538 (Mapped)
MLOC_34154.1NoneAvailableNonecontig_242618 (Not mapped)
MLOC_41166.1NoneAvailableNonecontig_2575058 (Mapped)
MLOC_41183.1NoneAvailableNonecontig_2575568 (Mapped)
MLOC_41235.1NoneAvailableNonecontig_2578728 (Mapped)
MLOC_41633.1NoneAvailableNonecontig_2598338 (Not mapped)
MLOC_47987.1NoneAvailableNonecontig_315801 (Not mapped)
MLOC_49862.1NoneAvailableNonecontig_349776 (Not mapped)
MLOC_50618.1NoneAvailableNonecontig_363201 (Not mapped)
MLOC_60770.1NoneAvailableNonecontig_44760 (Mapped)
MLOC_8482.1NoneAvailableNonecontig_143367 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----