MLOC_41588 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.816170.952961.733940
LEAShoots from the seedlings (10 cm shoot stage)0.400980.4217090.7895460
INF1Young developing inflorescences (5mm)0.6323381.316351.554740
INF2Developing inflorescences (1-1.5 cm)1.767730.7649460.821550
ROORoots from the seedlings (10 cm shoot stage)1.473021.033210.7268330
NODDeveloping tillers at six leaf stage, 3rd internode0.3501911.522480.5942640
CAR5Developing grain, bracts removed (5 DPA)3.317941.86854.261720
CAR15Developing grain, bracts removed (15 DPA)0.5912270.214160.3006570



CDS Structure of MLOC_41588






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK248907.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK248907.1CUST_23217_PI427708080NoneNoneNone
MLOC_32623.1NoneAvailableNonecontig_2303857 (Not mapped)
MLOC_35349.1NoneAvailableAvailablecontig_247700 (Mapped)
MLOC_41588.1NoneAvailableNonecontig_259666 (Mapped)
MLOC_48262.1NoneAvailableNonecontig_320346 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----