- Predicted Gene MLOC_41510
MLOC_41510 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 1.1831 | 3.70076 | 1.05422 | 1.84236 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 1.24504 | 3.43519 | 2.37749 | 1.51845 |
INF1 | Young developing inflorescences (5mm) | 3.08337 | 4.63117 | 4.28446 | 2.62379 |
INF2 | Developing inflorescences (1-1.5 cm) | 7.191 | 5.05704 | 5.65931 | 5.50909 |
ROO | Roots from the seedlings (10 cm shoot stage) | 1.35617 | 2.41538 | 2.17544 | 2.09357 |
NOD | Developing tillers at six leaf stage, 3rd internode | 2.08435 | 1.65307 | 2.06065 | 4.47032 |
CAR5 | Developing grain, bracts removed (5 DPA) | 2.86065 | 3.72298 | 3.28007 | 2.77197 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.757135 | 1.12402 | 1.56692 | 2.12938 |
CDS Structure of MLOC_41510
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_41510.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os04g02150.2 |
+1 |
1e-19 |
87 |
42/51 (82%) |
13104.m00133 protein tRNA methyltransferase, putative, expressed |
TAIR PP10 |
AT2G45730.1 |
+1 |
7e-15 |
72 |
35/51 (69%) |
eukaryotic initiation factor 3 gamma subunit family protein | chr2:18836519-18839123 REVERSE LENGTH=446 |