MLOC_41509 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains01.162130.716420
LEAShoots from the seedlings (10 cm shoot stage)0.4373782.618991.439730
INF1Young developing inflorescences (5mm)0.7256650.967180.8714770
INF2Developing inflorescences (1-1.5 cm)0.5953481.261050.5257620
ROORoots from the seedlings (10 cm shoot stage)0.4690710.51036200
NODDeveloping tillers at six leaf stage, 3rd internode1.484091.17611.307840
CAR5Developing grain, bracts removed (5 DPA)1.236641.334081.071990
CAR15Developing grain, bracts removed (15 DPA)0.7272980.2518170.7227860



CDS Structure of MLOC_41509






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK355680
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK355680CUST_19549_PI427708080NoneNoneNone
MLOC_1432.1NoneAvailableNonecontig_1124581 (Mapped)
MLOC_1721.1NoneAvailableNonecontig_115379 (Mapped)
MLOC_19654.2NoneAvailableAvailablecontig_158583 (Mapped)
MLOC_26414.1NoneAvailableNonecontig_1754257 (Not mapped)
MLOC_28399.1NoneAvailableNonecontig_1914539 (Mapped)
MLOC_28766.3NoneAvailableNonecontig_194588 (Mapped)
MLOC_30083.1NoneAvailableNonecontig_206337 (Not mapped)
MLOC_30447.1NoneAvailableNonecontig_2097934 (Not mapped)
MLOC_32423.1NoneAvailableNonecontig_2285024 (Not mapped)
MLOC_32474.1NoneAvailableNonecontig_2288934 (Not mapped)
MLOC_34292.1NoneAvailableNonecontig_2433807 (Not mapped)
MLOC_40540.1NoneAvailableNonecontig_2560861 (Mapped)
MLOC_41509.1NoneAvailableNonecontig_259207 (Mapped)
MLOC_43661.1NoneAvailableNonecontig_271927 (Mapped)
MLOC_45977.1NoneAvailableNonecontig_283829 (Not mapped)
MLOC_47343.1NoneAvailableNonecontig_304483 (Mapped)
MLOC_48137.1NoneAvailableNonecontig_318199 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----