MLOC_41485 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains9.89244.217175.123880
LEAShoots from the seedlings (10 cm shoot stage)2.651231.828784.595470
INF1Young developing inflorescences (5mm)7.033119.538514.47880
INF2Developing inflorescences (1-1.5 cm)3.113095.356215.828090
ROORoots from the seedlings (10 cm shoot stage)8.893511.864854.124160
NODDeveloping tillers at six leaf stage, 3rd internode2.117693.720372.085990
CAR5Developing grain, bracts removed (5 DPA)7.48119.041768.809920
CAR15Developing grain, bracts removed (15 DPA)3.63553.607834.353090



CDS Structure of MLOC_41485






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK252987.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK252987.1CUST_19220_PI427708080NoneNoneNone
MLOC_2918.1NoneAvailableNonecontig_126150 (Mapped)
MLOC_41485.1NoneAvailableNonecontig_2590664 (Not mapped)
MLOC_5853.2NoneAvailableAvailablecontig_136790 (Mapped)
MLOC_78928.1NoneAvailableNonecontig_82534 (Mapped)
MLOC_9607.1NoneAvailableNonecontig_153818 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----