MLOC_41474 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains397.404581.575575.0940
LEAShoots from the seedlings (10 cm shoot stage)310.428126.357123.4470
INF1Young developing inflorescences (5mm)213.459172.174157.2560
INF2Developing inflorescences (1-1.5 cm)141.688147.028142.0860
ROORoots from the seedlings (10 cm shoot stage)340.814286.572210.5370
NODDeveloping tillers at six leaf stage, 3rd internode334.949307.36152.0430
CAR5Developing grain, bracts removed (5 DPA)332.333330.986364.9270
CAR15Developing grain, bracts removed (15 DPA)62.337343.964151.16340



CDS Structure of MLOC_41474






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK250247.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK250247.1CUST_18818_PI427708080NoneNoneNone
MLOC_24649.1NoneAvailableNonecontig_165020 (Mapped)
MLOC_27383.1NoneAvailableNonecontig_182642 (Mapped)
MLOC_32595.1NoneAvailableNonecontig_2301155 (Not mapped)
MLOC_34412.1NoneAvailableNonecontig_2437876 (Not mapped)
MLOC_36225.1NoneAvailableNonecontig_2540357 (Not mapped)
MLOC_36965.2NoneAvailableAvailablecontig_2547568 (Mapped)
MLOC_41474.1NoneAvailableNonecontig_259010 (Mapped)
MLOC_41581.1NoneAvailableNonecontig_2596273 (Not mapped)
MLOC_51972.1NoneAvailableNonecontig_371952 (Not mapped)
MLOC_5620.1NoneAvailableNonecontig_1364635 (Not mapped)
MLOC_78155.1NoneAvailableNonecontig_789266 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----