MLOC_41438 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.4978350.85983600
LEAShoots from the seedlings (10 cm shoot stage)1.939651.587610.8185360
INF1Young developing inflorescences (5mm)1.26950.365532.134670
INF2Developing inflorescences (1-1.5 cm)1.947790.9505921.579070
ROORoots from the seedlings (10 cm shoot stage)001.135350
NODDeveloping tillers at six leaf stage, 3rd internode1.947750.6249940.8630480
CAR5Developing grain, bracts removed (5 DPA)0.8200212.276281.606620
CAR15Developing grain, bracts removed (15 DPA)2.819161.0728200



CDS Structure of MLOC_41438






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK373887
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK373887CUST_25795_PI427708080NoneNoneNone
MLOC_1896.1NoneAvailableNonecontig_1169186 (Not mapped)
MLOC_26260.1NoneAvailableNonecontig_1744408 (Mapped)
MLOC_29508.1NoneAvailableNonecontig_2012068 (Mapped)
MLOC_31516.1NoneAvailableNonecontig_219765 (Mapped)
MLOC_41438.1NoneAvailableNonecontig_2588457 (Mapped)
MLOC_41954.1NoneAvailableNonecontig_2615475 (Not mapped)
MLOC_42260.1NoneAvailableNonecontig_263371 (Not mapped)
MLOC_46900.1NoneAvailableAvailablecontig_297417 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----