MLOC_41415 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.606408000.456663
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)0.392638000.363272
INF2Developing inflorescences (1-1.5 cm)5.268650.7535521.956223.39381
ROORoots from the seedlings (10 cm shoot stage)0000
NODDeveloping tillers at six leaf stage, 3rd internode1.962880.1702481.166271.30056
CAR5Developing grain, bracts removed (5 DPA)1.918510.4444550.4431041.03328
CAR15Developing grain, bracts removed (15 DPA)0.565547002.00288



CDS Structure of MLOC_41415






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_41415.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_41415.1CUST_5779_PI427708083AvailableAvailablecontig_2587606 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g69850.1 -3 4e-15 67 33/41 (80%) 13101.m07576 protein OsMADS65 - MADS-box family gene with MIKC* type-box, expressed
TAIR PP10None-----