MLOC_41377 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains33.818227.992329.6940
LEAShoots from the seedlings (10 cm shoot stage)27.260947.328549.75020
INF1Young developing inflorescences (5mm)34.152245.570277.47130
INF2Developing inflorescences (1-1.5 cm)39.919533.11540.69240
ROORoots from the seedlings (10 cm shoot stage)66.950149.128145.52270
NODDeveloping tillers at six leaf stage, 3rd internode32.25755.561155.34760
CAR5Developing grain, bracts removed (5 DPA)17.48914.544314.24520
CAR15Developing grain, bracts removed (15 DPA)3.268014.78743.406780



CDS Structure of MLOC_41377






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK369867
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK369867CUST_25385_PI427708080NoneNoneNone
MLOC_41377.1NoneAvailableNonecontig_2585918 (Not mapped)
MLOC_48483.1NoneAvailableNonecontig_324459 (Not mapped)
MLOC_49171.1NoneAvailableNonecontig_336967 (Not mapped)
MLOC_69612.1NoneAvailableAvailablecontig_56694 (Mapped)
MLOC_79021.1NoneAvailableNonecontig_8302 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----