- Predicted Gene MLOC_41311
- Gene IDMLOC_41311
- Source Contig contig_2582226
MLOC_41311 FPKM values
FPKM by Treatment | FPKM by Replicate |
---|---|
There are no FPKM-by-treatment values calculated for this gene. | ![]() |
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|---|---|---|---|---|
EMB | 4-day embryos dissected from germinating grains | 8.3558 | 14.5295 | 14.2591 | 0 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 13.2099 | 7.43157 | 12.3368 | 0 |
INF1 | Young developing inflorescences (5mm) | 15.0042 | 20.1496 | 34.3761 | 0 |
INF2 | Developing inflorescences (1-1.5 cm) | 28.9159 | 22.0335 | 25.1744 | 0 |
ROO | Roots from the seedlings (10 cm shoot stage) | 7.15232 | 8.19502 | 8.60848 | 0 |
NOD | Developing tillers at six leaf stage, 3rd internode | 13.4629 | 16.9463 | 17.3503 | 0 |
CAR5 | Developing grain, bracts removed (5 DPA) | 15.591 | 14.1438 | 12.4829 | 0 |
CAR15 | Developing grain, bracts removed (15 DPA) | 5.22129 | 5.73315 | 7.12731 | 0 |
CDS Structure of MLOC_41311
![](/morexGenes/blast_net_images/MLOC_41311_assembly3_WGSMorex_rbca.fasta_genes.png)
Members of Gene Cluster
This cluster has a confidence assignment of High Confidence.The gene has a transcript that is part of a cluster represented by AK249301.1
Cluster member | Probe ID | FPKM by replicate | FPKM by treatment | Source Contig |
---|---|---|---|---|
AK249301.1 | CUST_23254_PI427708080 | None | None | None |
MLOC_13145.1 | None | Available | None | contig_156493 (Mapped) |
MLOC_1912.1 | None | Available | None | contig_1170319 (Not mapped) |
MLOC_2544.1 | None | Available | None | contig_1226734 (Not mapped) |
MLOC_2887.1 | None | Available | None | contig_1257715 (Not mapped) |
MLOC_29047.1 | None | Available | None | contig_1969596 (Not mapped) |
MLOC_30776.1 | None | Available | None | contig_21252 (Not mapped) |
MLOC_33489.1 | None | Available | None | contig_237800 (Not mapped) |
MLOC_35846.1 | None | Available | None | contig_252373 (Mapped) |
MLOC_41311.1 | None | Available | None | contig_2582226 (Not mapped) |
MLOC_42452.1 | None | Available | None | contig_2645397 (Not mapped) |
MLOC_46466.1 | None | Available | None | contig_290832 (Mapped) |
MLOC_47434.1 | None | Available | None | contig_306050 (Mapped) |
MLOC_48547.1 | None | Available | Available | contig_325745 (Not mapped) |
MLOC_59622.1 | None | Available | None | contig_437690 (Mapped) |
MLOC_80103.1 | None | Available | None | contig_886570 (Not mapped) |
MLOC_955.1 | None | Available | None | contig_1079535 (Mapped) |
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|---|---|---|---|---|---|
Rice PP6 | None | - | - | - | - | - |
TAIR PP10 | None | - | - | - | - | - |