MLOC_41307 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.985624000
LEAShoots from the seedlings (10 cm shoot stage)000.34880
INF1Young developing inflorescences (5mm)0.20244800.7683020
INF2Developing inflorescences (1-1.5 cm)00.3337130.2403220
ROORoots from the seedlings (10 cm shoot stage)0.4322940.23388900
NODDeveloping tillers at six leaf stage, 3rd internode00.5044010.5526460
CAR5Developing grain, bracts removed (5 DPA)0.222710.4063900
CAR15Developing grain, bracts removed (15 DPA)0.2014390.4266460.3035530



CDS Structure of MLOC_41307






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK251104.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK251104.1CUST_18949_PI427708080NoneNoneNone
MLOC_17797.1NoneAvailableNonecontig_1578086 (Mapped)
MLOC_27332.1NoneAvailableNonecontig_1823075 (Mapped)
MLOC_29898.1NoneAvailableNonecontig_204773 (Mapped)
MLOC_30057.1NoneAvailableNonecontig_2060671 (Mapped)
MLOC_32270.1NoneAvailableNonecontig_227033 (Not mapped)
MLOC_32287.1NoneAvailableNonecontig_227167 (Mapped)
MLOC_35059.1NoneAvailableNonecontig_2454544 (Mapped)
MLOC_41307.1NoneAvailableNonecontig_2582023 (Not mapped)
MLOC_48366.1NoneAvailableNonecontig_322239 (Not mapped)
MLOC_52104.1NoneAvailableNonecontig_372875 (Not mapped)
MLOC_52810.1NoneAvailableNonecontig_378121 (Mapped)
MLOC_66548.1NoneAvailableAvailablecontig_51741 (Mapped)
MLOC_76557.1NoneAvailableNonecontig_718451 (Not mapped)
MLOC_78514.1NoneAvailableNonecontig_806502 (Not mapped)
MLOC_78671.1NoneAvailableNonecontig_813667 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----