MLOC_41275 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains30.433418.673654.2210
LEAShoots from the seedlings (10 cm shoot stage)3.2704122.587524.50180
INF1Young developing inflorescences (5mm)3.537717.1859817.29050
INF2Developing inflorescences (1-1.5 cm)3.507131.5555500
ROORoots from the seedlings (10 cm shoot stage)07.7563814.58150
NODDeveloping tillers at six leaf stage, 3rd internode9.232533.102441.944290
CAR5Developing grain, bracts removed (5 DPA)10.976.734266.584920
CAR15Developing grain, bracts removed (15 DPA)1.8200902.96250



CDS Structure of MLOC_41275






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK359551
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK359551CUST_20109_PI427708080NoneNoneNone
MLOC_32232.1NoneAvailableNonecontig_226593 (Mapped)
MLOC_41275.1NoneAvailableNonecontig_2580534 (Not mapped)
MLOC_42127.1NoneAvailableNonecontig_2626179 (Not mapped)
MLOC_42826.1NoneAvailableAvailablecontig_2664800 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----