MLOC_41229 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.4269480.892230.5576840.581286
LEAShoots from the seedlings (10 cm shoot stage)3.45941.801742.995142.10143
INF1Young developing inflorescences (5mm)0.0606454000.0585905
INF2Developing inflorescences (1-1.5 cm)0.05312080.2488950.1401840.145217
ROORoots from the seedlings (10 cm shoot stage)0.1251320.073547700.139229
NODDeveloping tillers at six leaf stage, 3rd internode20.450126.395711.832362.863
CAR5Developing grain, bracts removed (5 DPA)0.6306821.147741.175260.756732
CAR15Developing grain, bracts removed (15 DPA)0.3148920.0663750.5496330.585014



CDS Structure of MLOC_41229






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_41229.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_41229.1CUST_12371_PI427708083AvailableAvailablecontig_2578478 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g38220.1 -3 1e-43 160 78/85 (92%) 13104.m03664 protein transporter family protein, putative, expressed
TAIR PP10 AT1G34580.1 -3 3e-24 103 50/85 (59%) Major facilitator superfamily protein | chr1:12660631-12663553 FORWARD LENGTH=506