MLOC_41216 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.522415.394144.018240
LEAShoots from the seedlings (10 cm shoot stage)6.127583.757897.257650
INF1Young developing inflorescences (5mm)8.698379.005697.945780
INF2Developing inflorescences (1-1.5 cm)16.334912.242513.84370
ROORoots from the seedlings (10 cm shoot stage)4.184245.616436.35370
NODDeveloping tillers at six leaf stage, 3rd internode4.353474.89955.864540
CAR5Developing grain, bracts removed (5 DPA)7.094636.207376.081780
CAR15Developing grain, bracts removed (15 DPA)2.755613.250921.452950



CDS Structure of MLOC_41216






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK249030.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK249030.1CUST_18640_PI427708080NoneNoneNone
MLOC_2451.1NoneAvailableNonecontig_121765 (Mapped)
MLOC_31322.1NoneAvailableNonecontig_217907 (Mapped)
MLOC_32233.1NoneAvailableNonecontig_226625 (Mapped)
MLOC_32784.1NoneAvailableNonecontig_2319123 (Not mapped)
MLOC_34826.1NoneAvailableAvailablecontig_244676 (Mapped)
MLOC_41216.1NoneAvailableNonecontig_2577685 (Not mapped)
MLOC_41264.1NoneAvailableNonecontig_2580100 (Mapped)
MLOC_42773.1NoneAvailableNonecontig_2662061 (Not mapped)
MLOC_48901.1NoneAvailableNonecontig_331757 (Not mapped)
MLOC_52648.1NoneAvailableNonecontig_376837 (Mapped)
MLOC_54772.1NoneAvailableNonecontig_393883 (Mapped)
MLOC_77684.1NoneAvailableNonecontig_76706 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----