MLOC_41205 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains26.299442.337526.32370
LEAShoots from the seedlings (10 cm shoot stage)31.407813.551823.51960
INF1Young developing inflorescences (5mm)19.539818.151916.80080
INF2Developing inflorescences (1-1.5 cm)29.29830.840930.77090
ROORoots from the seedlings (10 cm shoot stage)17.412720.36266.711020
NODDeveloping tillers at six leaf stage, 3rd internode16.57726.021624.99240
CAR5Developing grain, bracts removed (5 DPA)25.419225.702724.21260
CAR15Developing grain, bracts removed (15 DPA)14.23358.6430113.43290



CDS Structure of MLOC_41205






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK370403
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK370403CUST_25446_PI427708080NoneNoneNone
MLOC_25195.1NoneAvailableNonecontig_16766 (Mapped)
MLOC_41205.1NoneAvailableNonecontig_2576945 (Not mapped)
MLOC_41608.1NoneAvailableNonecontig_259727 (Mapped)
MLOC_76220.1NoneAvailableAvailablecontig_7057 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----