MLOC_4117 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.7042141.571991.711291.23997
LEAShoots from the seedlings (10 cm shoot stage)2.722670.8453090.6160911.22946
INF1Young developing inflorescences (5mm)1.913021.97611.840471.48816
INF2Developing inflorescences (1-1.5 cm)2.402681.812692.134742.03118
ROORoots from the seedlings (10 cm shoot stage)2.39362.923643.399693.34655
NODDeveloping tillers at six leaf stage, 3rd internode5.740812.072963.134327.29355
CAR5Developing grain, bracts removed (5 DPA)1.966622.42581.981991.82364
CAR15Developing grain, bracts removed (15 DPA)0.4931450.4032270.670331.00985



CDS Structure of MLOC_4117






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_4117.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_4117.1CUST_12367_PI427708083AvailableAvailablecontig_134706 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g36730.1 +2 4e-39 149 66/67 (99%) 13109.m03625 protein MYB family transcription factor, putative, expressed
TAIR PP10 AT4G38620.1 +2 1e-38 148 65/67 (97%) | Symbols: ATMYB4, MYB4 | myb domain protein 4 | chr4:18053866-18054876 FORWARD LENGTH=282