MLOC_41166 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.3149903.226880
LEAShoots from the seedlings (10 cm shoot stage)0.9086451.089661.067310
INF1Young developing inflorescences (5mm)1.853972.044493.002660
INF2Developing inflorescences (1-1.5 cm)3.862381.233693.164650
ROORoots from the seedlings (10 cm shoot stage)1.224251.3082600
NODDeveloping tillers at six leaf stage, 3rd internode0.8210070.7441630.3065290
CAR5Developing grain, bracts removed (5 DPA)1.629191.5036600
CAR15Developing grain, bracts removed (15 DPA)000.6726120



CDS Structure of MLOC_41166






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK372440
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK372440CUST_25642_PI427708080NoneNoneNone
MLOC_1019.1NoneAvailableNonecontig_1085557 (Not mapped)
MLOC_24100.1NoneAvailableNonecontig_1636694 (Mapped)
MLOC_27107.2NoneAvailableNonecontig_180696 (Not mapped)
MLOC_27559.1NoneAvailableNonecontig_1843194 (Mapped)
MLOC_29015.1NoneAvailableAvailablecontig_1966601 (Mapped)
MLOC_33706.1NoneAvailableNonecontig_239659 (Mapped)
MLOC_34133.1NoneAvailableNonecontig_242538 (Mapped)
MLOC_34154.1NoneAvailableNonecontig_242618 (Not mapped)
MLOC_41166.1NoneAvailableNonecontig_2575058 (Mapped)
MLOC_41183.1NoneAvailableNonecontig_2575568 (Mapped)
MLOC_41235.1NoneAvailableNonecontig_2578728 (Mapped)
MLOC_41633.1NoneAvailableNonecontig_2598338 (Not mapped)
MLOC_47987.1NoneAvailableNonecontig_315801 (Not mapped)
MLOC_49862.1NoneAvailableNonecontig_349776 (Not mapped)
MLOC_50618.1NoneAvailableNonecontig_363201 (Not mapped)
MLOC_60770.1NoneAvailableNonecontig_44760 (Mapped)
MLOC_8482.1NoneAvailableNonecontig_143367 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----