MLOC_4115 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0.553422 | 0.796132 | 0.690865 | 0.824939 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 1.5226 | 0.454122 | 1.23412 | 0.990665 |
| INF1 | Young developing inflorescences (5mm) | 2.88305 | 2.87987 | 2.97638 | 2.75567 |
| INF2 | Developing inflorescences (1-1.5 cm) | 7.62798 | 12.2768 | 9.83029 | 12.6459 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 14.8609 | 13.0397 | 7.59031 | 17.4525 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.239207 | 0.393235 | 0.229462 | 1.18854 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 1.06001 | 1.17457 | 1.33226 | 1.36828 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 8.85141 | 9.5759 | 8.75892 | 24.4168 |
CDS Structure of MLOC_4115
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_4115.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os07g43160.1 |
+2 |
3e-151 |
443 |
231/346 (67%) |
13107.m04534 protein uncharacterized glycosyl hydrolase Rv2006/MT2062, putative, expressed |
| TAIR PP10 |
AT2G22190.1 |
+2 |
4e-128 |
383 |
198/302 (66%) |
| Symbols: TPPE | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein | chr2:9433897-9436482 REVERSE LENGTH=354 |
