MLOC_41139 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains00.1731520.459890.162541
LEAShoots from the seedlings (10 cm shoot stage)00.1081490.4877330.214883
INF1Young developing inflorescences (5mm)0.4957450.3553841.7410.536466
INF2Developing inflorescences (1-1.5 cm)1.506371.86471.129681.46641
ROORoots from the seedlings (10 cm shoot stage)00.2295080.635780.338231
NODDeveloping tillers at six leaf stage, 3rd internode0.5146530.3683890.2861221.09879
CAR5Developing grain, bracts removed (5 DPA)0.5915730.5315370.4417490.43562
CAR15Developing grain, bracts removed (15 DPA)0.4603390.3269110.4836910.893839



CDS Structure of MLOC_41139






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_41139.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_41139.1CUST_12365_PI427708083AvailableAvailablecontig_257397 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g38620.1 +1 4e-27 89 40/48 (83%) 13109.m03850 protein NADPH reductase, putative, expressed
TAIR PP10 AT4G24520.1 +1 3e-21 78 33/48 (69%) | Symbols: ATR1, AR1 | P450 reductase 1 | chr4:12663065-12667066 REVERSE LENGTH=692