MLOC_41031 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains6.660086.010766.58136.71856
LEAShoots from the seedlings (10 cm shoot stage)9.516656.575048.635347.73984
INF1Young developing inflorescences (5mm)7.8520712.238513.36769.59572
INF2Developing inflorescences (1-1.5 cm)14.880511.548314.524715.2976
ROORoots from the seedlings (10 cm shoot stage)5.457764.6623310.47887.10865
NODDeveloping tillers at six leaf stage, 3rd internode9.7156912.837813.815348.0618
CAR5Developing grain, bracts removed (5 DPA)2.673212.523092.539852.67729
CAR15Developing grain, bracts removed (15 DPA)1.29090.8980380.7942172.54394



CDS Structure of MLOC_41031






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_41031.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_41031.1CUST_12361_PI427708083AvailableAvailablecontig_2569509 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g31460.1 +1 1e-36 101 49/60 (82%) 13108.m03262 protein GTPase of unknown function domain containing protein, putative, expressed
TAIR PP10 AT1G78010.1 +1 3e-26 82 36/60 (60%) tRNA modification GTPase, putative | chr1:29333535-29336297 FORWARD LENGTH=560