MLOC_41030 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains5.105653.64664.112743.77657
LEAShoots from the seedlings (10 cm shoot stage)4.130546.489358.643334.38189
INF1Young developing inflorescences (5mm)8.868898.5769311.8787.81558
INF2Developing inflorescences (1-1.5 cm)7.649988.9519411.18939.42852
ROORoots from the seedlings (10 cm shoot stage)8.07445.831878.230816.51645
NODDeveloping tillers at six leaf stage, 3rd internode3.786664.609984.075959.66027
CAR5Developing grain, bracts removed (5 DPA)7.222365.355128.435386.38246
CAR15Developing grain, bracts removed (15 DPA)3.206553.628132.685986.79992



CDS Structure of MLOC_41030






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_41030.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_41030.1NoneAvailableAvailablecontig_2569406 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g49440.2 -2 1e-24 96 40/45 (89%) 13105.m05291 protein DUF1264 domain containing protein, putative, expressed
TAIR PP10 AT1G05510.1 -2 1e-22 89 37/45 (82%) Protein of unknown function (DUF1264) | chr1:1629527-1630690 FORWARD LENGTH=241