- Predicted Gene MLOC_41030
MLOC_41030 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 5.10565 | 3.6466 | 4.11274 | 3.77657 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 4.13054 | 6.48935 | 8.64333 | 4.38189 |
INF1 | Young developing inflorescences (5mm) | 8.86889 | 8.57693 | 11.878 | 7.81558 |
INF2 | Developing inflorescences (1-1.5 cm) | 7.64998 | 8.95194 | 11.1893 | 9.42852 |
ROO | Roots from the seedlings (10 cm shoot stage) | 8.0744 | 5.83187 | 8.23081 | 6.51645 |
NOD | Developing tillers at six leaf stage, 3rd internode | 3.78666 | 4.60998 | 4.07595 | 9.66027 |
CAR5 | Developing grain, bracts removed (5 DPA) | 7.22236 | 5.35512 | 8.43538 | 6.38246 |
CAR15 | Developing grain, bracts removed (15 DPA) | 3.20655 | 3.62813 | 2.68598 | 6.79992 |
CDS Structure of MLOC_41030
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_41030.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os05g49440.2 |
-2 |
1e-24 |
96 |
40/45 (89%) |
13105.m05291 protein DUF1264 domain containing protein, putative, expressed |
TAIR PP10 |
AT1G05510.1 |
-2 |
1e-22 |
89 |
37/45 (82%) |
Protein of unknown function (DUF1264) | chr1:1629527-1630690 FORWARD LENGTH=241 |