MLOC_40952 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1396.91058.481183.420
LEAShoots from the seedlings (10 cm shoot stage)732.088284.624297.2090
INF1Young developing inflorescences (5mm)1477.551567.281446.570
INF2Developing inflorescences (1-1.5 cm)921.64736.821999.9780
ROORoots from the seedlings (10 cm shoot stage)1321.42684.277747.3320
NODDeveloping tillers at six leaf stage, 3rd internode147.476152.513138.1880
CAR5Developing grain, bracts removed (5 DPA)1195.861091.911075.910
CAR15Developing grain, bracts removed (15 DPA)599.953574.241496.7560



CDS Structure of MLOC_40952






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK248954.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK248954.1CUST_18628_PI427708080NoneNoneNone
MLOC_3679.4NoneAvailableAvailablecontig_132622 (Mapped)
MLOC_40952.1NoneAvailableNonecontig_2567264 (Mapped)
MLOC_48031.1NoneAvailableNonecontig_31647 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----