MLOC_40751 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains11.224410.621512.70279.17967
LEAShoots from the seedlings (10 cm shoot stage)9.903557.237929.021215.93326
INF1Young developing inflorescences (5mm)13.878115.600615.577110.5985
INF2Developing inflorescences (1-1.5 cm)13.681813.828415.005712.7474
ROORoots from the seedlings (10 cm shoot stage)16.399410.197413.006810.2653
NODDeveloping tillers at six leaf stage, 3rd internode10.26219.4521112.184922.6618
CAR5Developing grain, bracts removed (5 DPA)14.447812.684216.244911.2325
CAR15Developing grain, bracts removed (15 DPA)4.888313.670774.869498.88971



CDS Structure of MLOC_40751






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_40751.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_40751.1NoneAvailableAvailablecontig_2564018 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g47790.3 +1 9e-173 512 280/314 (89%) 13103.m05153 protein transposon protein, putative, unclassified, expressed
TAIR PP10 AT3G09880.1 +1 1e-139 424 224/314 (71%) | Symbols: ATB BETA | Protein phosphatase 2A regulatory B subunit family protein | chr3:3029902-3031931 FORWARD LENGTH=499