MLOC_40736 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains9.66874010.97660
LEAShoots from the seedlings (10 cm shoot stage)5.61695000
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)2.519722.5434300
ROORoots from the seedlings (10 cm shoot stage)0011.2670
NODDeveloping tillers at six leaf stage, 3rd internode5.5795701.086040
CAR5Developing grain, bracts removed (5 DPA)13.804514.79149.693970
CAR15Developing grain, bracts removed (15 DPA)8.89407000



CDS Structure of MLOC_40736






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK356659
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK356659CUST_23932_PI427708080NoneNoneNone
MLOC_28553.1NoneAvailableNonecontig_1928810 (Not mapped)
MLOC_33779.1NoneAvailableNonecontig_2402082 (Not mapped)
MLOC_34346.1NoneAvailableAvailablecontig_243621 (Not mapped)
MLOC_40736.1NoneAvailableNonecontig_2563657 (Mapped)
MLOC_42075.1NoneAvailableNonecontig_2622770 (Not mapped)
MLOC_52426.1NoneAvailableNonecontig_375229 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----