MLOC_40676 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains00.13992500
LEAShoots from the seedlings (10 cm shoot stage)0.54851100.2133450
INF1Young developing inflorescences (5mm)1.363390.444350.3792380
INF2Developing inflorescences (1-1.5 cm)0.7749631.42080.6208230
ROORoots from the seedlings (10 cm shoot stage)00.30081400
NODDeveloping tillers at six leaf stage, 3rd internode0.4272850.379990.3236670
CAR5Developing grain, bracts removed (5 DPA)00.12965200
CAR15Developing grain, bracts removed (15 DPA)0.3247770.163590.2383570



CDS Structure of MLOC_40676






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK374884
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK374884CUST_22733_PI427708080NoneNoneNone
MLOC_25062.1NoneAvailableNonecontig_1668648 (Mapped)
MLOC_30480.1NoneAvailableNonecontig_2101822 (Not mapped)
MLOC_30967.1NoneAvailableNonecontig_214406 (Mapped)
MLOC_30968.2NoneAvailableNonecontig_214406 (Mapped)
MLOC_31135.1NoneAvailableNonecontig_216023 (Mapped)
MLOC_3433.3NoneAvailableAvailablecontig_130818 (Mapped)
MLOC_40675.1NoneAvailableNonecontig_2562853 (Mapped)
MLOC_40676.2NoneAvailableNonecontig_2562853 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----